Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000012696annotation not available (163 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.708
tex10
Testis expressed 10.
   
 0.682
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.630
gnl2
G protein nucleolar 2.
   
 0.554
bop1
BOP1 ribosomal biogenesis factor.
   
  0.504
cep152
Centrosomal protein 152.
   
  0.504
RPL38
Ribosomal protein L38.
    
  0.484
rpl32
Ribosomal protein L32.
    
  0.484
RPL7A
Ribosomal protein L7a.
    
  0.481
rpl18
Ribosomal protein L18.
    
  0.481
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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