Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nosipNitric oxide synthase interacting protein. (318 aa)    
Predicted Functional Partners:
snrnp40
Small nuclear ribonucleoprotein U5 subunit 40.
 
      0.898
nos1
Nitric oxide synthase 1.
    
 0.867
ppil3
Peptidylprolyl isomerase like 3.
    
 
 0.808
ttc37
Tetratricopeptide repeat domain 37.
      
 0.732
poll
DNA polymerase lambda.
    
   0.723
prrg2
Proline rich and Gla domain 2.
      
 0.707
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
    
 0.686
LOC114868725
NADPH--cytochrome P450 reductase.
    
 0.686
tp53bp1
Tumor protein p53 binding protein 1.
    
   0.683
lcmt1
Leucine carboxyl methyltransferase 1.
      
 0.652
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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