STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosipNitric oxide synthase interacting protein. (318 aa)    
Predicted Functional Partners:
snrnp40
Small nuclear ribonucleoprotein U5 subunit 40.
 
      0.898
nos1
Nitric oxide synthase 1.
    
 0.848
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
    
 0.777
LOC114868725
NADPH--cytochrome P450 reductase.
    
 0.777
ndor1
NADPH dependent diflavin oxidoreductase 1.
    
 0.764
ppp4r1
Protein phosphatase 4 regulatory subunit 1.
   
  0.655
nup85
Nucleoporin 85.
   
 
  0.620
c9h9orf78
Chromosome 9 C9orf78 homolog.
   
  
 0.551
prrg2
Proline rich and Gla domain 2.
      
 0.541
pgs1
Phosphatidylglycerophosphate synthase 1.
 
 
    0.518
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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