STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861767Formin-binding protein 1-like. (628 aa)    
Predicted Functional Partners:
LOC114852798
Intersectin-2-like.
   
 0.831
itsn2
Intersectin 2.
   
 0.831
nckipsd
NCK interacting protein with SH3 domain.
    
 
 0.802
LOC114861783
Neural Wiskott-Aldrich syndrome protein-like.
   
 0.702
was
WASP actin nucleation promoting factor.
   
 0.702
ENSBSLP00000039151
annotation not available
   
 0.702
wasl
WASP like actin nucleation promoting factor.
   
 0.702
LOC114854739
Tumor necrosis factor ligand superfamily member 6-like.
    
   0.693
itsn1
Intersectin 1.
   
 0.690
ENSBSLP00000040410
annotation not available
   
 0.660
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.