STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agbl5ATP/GTP binding protein like 5. (968 aa)    
Predicted Functional Partners:
GLIPR1
GLI pathogenesis related 1.
      
 0.495
b3galnt2
beta-1,3-N-acetylgalactosaminyltransferase 2.
      
 0.487
lxn
Latexin.
    
 
 0.439
ythdc1
YTH domain containing 1.
      
 0.436
ttll11
Tubulin tyrosine ligase like 11.
      
 0.429
armc2
Armadillo repeat containing 2.
    
 
 0.426
ttll6
Tubulin tyrosine ligase like 6.
      
 0.422
ttll5
Tubulin tyrosine ligase like 5.
      
 0.414
fh
Fumarate hydratase.
    
  0.405
cep41
Centrosomal protein 41.
      
 0.405
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.