Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppm1dProtein phosphatase, Mg2+/Mn2+ dependent 1D. (578 aa)    
Predicted Functional Partners:
LOC114869961
Protein phosphatase 1D-like.
  
  
 
0.903
LOC114861437
Serine/threonine-protein kinase Chk2-like.
    
 
 0.823
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
  
 
 0.800
wdr90
WD repeat domain 90.
    
   0.733
cbfb
Core-binding factor subunit beta.
     
  0.684
mdm2
MDM2 proto-oncogene.
   
 
 0.675
traf7
TNF receptor associated factor 7.
   
 0.653
appbp2
Amyloid beta precursor protein binding protein 2.
  
 
 0.635
LOC114848842
Runt-related transcription factor 1-like.
    
 0.618
runx2
RUNX family transcription factor 2.
    
 0.618
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.