Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
selenoiSelenoprotein I. (385 aa)    
Predicted Functional Partners:
LOC114859987
Ethanolamine-phosphate cytidylyltransferase-like.
     
 0.991
pemt
Phosphatidylethanolamine N-methyltransferase.
    
 0.980
LOC114853760
Phospholipid phosphatase 2-like.
     
 0.973
LOC114848963
Phospholipid phosphatase 2-like.
     
 0.973
LOC114844874
Phospholipid phosphatase 3-like.
     
 0.972
plpp3
Phospholipid phosphatase 3.
     
 0.972
cept1
Choline/ethanolamine phosphotransferase 1.
     
0.969
LOC114861531
Phospholipid phosphatase 1-like.
     
 0.968
plpp1
Phospholipid phosphatase 1.
     
 0.968
chpt1
Choline phosphotransferase 1.
     
0.967
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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