Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc24a4Solute carrier family 24 member 4. (631 aa)    
Predicted Functional Partners:
dct
Dopachrome tautomerase.
      
 0.645
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.601
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.593
get3
Guided entry of tail-anchored proteins factor 3, ATPase.
  
   0.557
cux1
Cut like homeobox 1.
    
   0.487
cux2
Cut like homeobox 2.
    
   0.487
ykt6
YKT6 v-SNARE homolog.
    
   0.467
oca2
OCA2 melanosomal transmembrane protein.
  
  
 0.461
itgb6
Integrin subunit beta 6.
      
 0.461
dennd5a
DENN domain containing 5A.
   
  
 0.456
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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