STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
restRE1 silencing transcription factor. (914 aa)    
Predicted Functional Partners:
sin3b
SIN3 transcription regulator family member B.
    
 0.941
LOC114851916
Paired amphipathic helix protein Sin3a-like.
    
 0.941
sin3a
SIN3 transcription regulator family member A.
    
 0.941
htt
Huntingtin.
    
 0.936
rcor2
REST corepressor 2.
    
 0.923
rcor3
REST corepressor 3.
    
 0.923
kdm1a
Lysine demethylase 1A.
    
 0.873
hdac8
Histone deacetylase 8.
    
 0.840
HDAC2
Histone deacetylase 2.
    
 0.840
LOC114865711
Probable histone deacetylase 1-B.
    
 0.840
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.