Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC114853103Transcription factor LBX1-like. (271 aa)    
Predicted Functional Partners:
nudt6
Nudix hydrolase 6.
      
 0.449
ap1ar
Adaptor related protein complex 1 associated regulatory protein.
      
 0.449
LOC114853505
pre-B-cell leukemia transcription factor 1.
    
 0.430
LOC114842605
pre-B-cell leukemia transcription factor 1-like.
    
 0.430
LOC114860986
pre-B-cell leukemia transcription factor 1-like.
    
 0.430
pbx3
PBX homeobox 3.
    
 0.430
LOC114844734
pre-B-cell leukemia transcription factor 1.
    
 0.430
adad1
Adenosine deaminase domain containing 1.
    
 
 0.406
lef1
Lymphoid enhancer binding factor 1.
    
 0.404
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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