ENSBSLP00000012956 protein (Betta splendens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSBSLP00000012956

annotation not available (551 aa)

Predicted Functional Partners:

ENSBSLP00000009994

0.989

ENSBSLP00000010051

0.900

ENSBSLP00000009863

0.899

ENSBSLP00000009907

0.899

ENSBSLP00000013224

0.899

ENSBSLP00000054317

0.899

ENSBSLP00000013061

0.897

LOC114845084

0.865

LOC114866298

0.806

cfp

0.757

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSBSLP00000009863	ENSBSLP00000012956	ENSBSLP00000009863	ENSBSLP00000012956	annotation not available	annotation not available	0.899
ENSBSLP00000009863	ENSBSLP00000054317	ENSBSLP00000009863	ENSBSLP00000054317	annotation not available	annotation not available	0.894
ENSBSLP00000009863	LOC114845084	ENSBSLP00000009863	ENSBSLP00000012776	annotation not available	Myosin light chain kinase 2, skeletal/cardiac muscle-like.	0.896
ENSBSLP00000009863	LOC114866298	ENSBSLP00000009863	ENSBSLP00000020751	annotation not available	Death-associated protein kinase 2-like.	0.487
ENSBSLP00000009907	ENSBSLP00000012956	ENSBSLP00000009907	ENSBSLP00000012956	annotation not available	annotation not available	0.899
ENSBSLP00000009907	ENSBSLP00000054317	ENSBSLP00000009907	ENSBSLP00000054317	annotation not available	annotation not available	0.899
ENSBSLP00000009907	LOC114845084	ENSBSLP00000009907	ENSBSLP00000012776	annotation not available	Myosin light chain kinase 2, skeletal/cardiac muscle-like.	0.873
ENSBSLP00000009907	LOC114866298	ENSBSLP00000009907	ENSBSLP00000020751	annotation not available	Death-associated protein kinase 2-like.	0.811
ENSBSLP00000009994	ENSBSLP00000012956	ENSBSLP00000009994	ENSBSLP00000012956	annotation not available	annotation not available	0.989
ENSBSLP00000009994	ENSBSLP00000054317	ENSBSLP00000009994	ENSBSLP00000054317	annotation not available	annotation not available	0.899
ENSBSLP00000009994	LOC114845084	ENSBSLP00000009994	ENSBSLP00000012776	annotation not available	Myosin light chain kinase 2, skeletal/cardiac muscle-like.	0.884
ENSBSLP00000009994	LOC114866298	ENSBSLP00000009994	ENSBSLP00000020751	annotation not available	Death-associated protein kinase 2-like.	0.879
ENSBSLP00000010051	ENSBSLP00000012956	ENSBSLP00000010051	ENSBSLP00000012956	annotation not available	annotation not available	0.900
ENSBSLP00000010051	ENSBSLP00000054317	ENSBSLP00000010051	ENSBSLP00000054317	annotation not available	annotation not available	0.899
ENSBSLP00000010051	LOC114845084	ENSBSLP00000010051	ENSBSLP00000012776	annotation not available	Myosin light chain kinase 2, skeletal/cardiac muscle-like.	0.910
ENSBSLP00000010051	LOC114866298	ENSBSLP00000010051	ENSBSLP00000020751	annotation not available	Death-associated protein kinase 2-like.	0.883
ENSBSLP00000012956	ENSBSLP00000009863	ENSBSLP00000012956	ENSBSLP00000009863	annotation not available	annotation not available	0.899
ENSBSLP00000012956	ENSBSLP00000009907	ENSBSLP00000012956	ENSBSLP00000009907	annotation not available	annotation not available	0.899
ENSBSLP00000012956	ENSBSLP00000009994	ENSBSLP00000012956	ENSBSLP00000009994	annotation not available	annotation not available	0.989
ENSBSLP00000012956	ENSBSLP00000010051	ENSBSLP00000012956	ENSBSLP00000010051	annotation not available	annotation not available	0.900