STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865887Mediator of RNA polymerase II transcription subunit 10. (134 aa)    
Predicted Functional Partners:
med6
Mediator complex subunit 6.
   
 0.990
med11
Mediator complex subunit 11.
   
 0.989
med22
Mediator complex subunit 22.
   
 0.989
med31
Mediator complex subunit 31.
   
 0.989
med19
Mediator complex subunit 19.
    
 0.989
med14
Mediator complex subunit 14.
    
 0.989
med21
Mediator complex subunit 21.
    
 0.989
med17
Mediator complex subunit 17.
    
 0.989
med7
Mediator complex subunit 7.
    
 0.989
med18
Mediator complex subunit 18.
    
 0.989
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.