STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114850048Trace amine-associated receptor 1-like. (312 aa)    
Predicted Functional Partners:
GNG4
G protein subunit gamma 4.
    
  0.570
gng2
G protein subunit gamma 2.
    
  0.570
edn1
Endothelin 1.
    
 0.565
LOC114865854
Pro-neuropeptide Y.
    
 0.539
LOC114860647
Peptide YY-A-like.
    
 0.535
LOC114859463
Endothelin-3-like.
    
 0.518
LOC114856323
Endothelin-3-like.
    
 0.518
LOC114854338
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.512
LOC114845994
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2-like.
   
  0.511
LOC114859789
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
    
  0.510
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.