STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846376DNA-directed RNA polymerase III subunit RPC4-like. (384 aa)    
Predicted Functional Partners:
polr3f
RNA polymerase III subunit F.
   
 0.986
polr3c
RNA polymerase III subunit C.
   
 0.986
polr2h
RNA polymerase II subunit H.
   
 0.984
polr3e
RNA polymerase III subunit E.
   
 0.984
polr3a
RNA polymerase III subunit A.
   
 0.982
LOC114864500
DNA-directed RNA polymerases I and III subunit RPAC2-like.
   
 0.979
LOC114860302
DNA-directed RNA polymerase III subunit RPC8-like.
   
 0.979
polr3k
RNA polymerase III subunit K.
   
 0.979
polr2c
RNA polymerase II subunit C.
   
 0.978
polr3b
RNA polymerase III subunit B.
   
 0.978
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.