STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000013350annotation not available (90 aa)    
Predicted Functional Partners:
LOC114864912
Malate synthase-like.
  
 
  0.800
LOC114870611
Peripheral plasma membrane protein CASK-like.
    
  0.590
cask
Calcium/calmodulin dependent serine protein kinase.
    
  0.590
rps7
Ribosomal protein S7.
    
  0.552
utp11
UTP11 small subunit processome component.
    
  0.552
dcaf13
DDB1 and CUL4 associated factor 13.
    
  0.552
emg1
EMG1 N1-specific pseudouridine methyltransferase.
    
  0.552
fcf1
FCF1 rRNA-processing protein.
    
  0.552
rps6
Ribosomal protein S6.
   
  0.547
wdr46
WD repeat domain 46.
    
  0.540
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.