STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylbXylulokinase. (547 aa)    
Predicted Functional Partners:
sord
Sorbitol dehydrogenase.
  
 
 0.950
rpe
Ribulose-5-phosphate-3-epimerase.
  
 0.948
rbm45
RNA binding motif protein 45.
    
 0.940
rpia
Ribose 5-phosphate isomerase A.
    
 0.936
fuom
Fucose mutarotase.
  
 
 0.935
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.930
rgn
Regucalcin.
  
 
 0.924
gpd2
Glycerol-3-phosphate dehydrogenase 2.
  
 
 0.923
ENSBSLP00000054794
annotation not available
  
 
 0.923
IDNK
IDNK gluconokinase.
    
 0.921
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.