STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861637Protein mono-ADP-ribosyltransferase PARP12-like. (914 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.632
parp1
poly(ADP-ribose) polymerase 1.
    
 
 0.614
cpsf1
Cleavage and polyadenylation specific factor 1.
     
 0.582
cpsf2
Cleavage and polyadenylation specific factor 2.
  
 
  0.578
hdac11
Histone deacetylase 11.
   
  0.544
dhx58
DExH-box helicase 58.
   
 
 0.542
exosc5
Exosome component 5.
    
 
 0.542
aifm1
Apoptosis inducing factor mitochondria associated 1.
  
 0.540
exosc7
Exosome component 7.
    
 
 0.535
n4bp1
NEDD4 binding protein 1.
    
 
 0.508
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.