STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114868067Ras-related protein Rab-4B. (213 aa)    
Predicted Functional Partners:
rbsn
Rabenosyn, RAB effector.
    
 0.982
LOC114852798
Intersectin-2-like.
    
 0.892
itsn2
Intersectin 2.
    
 0.892
LOC114864720
RUN and FYVE domain-containing protein 2-like.
    
 0.889
itsn1
Intersectin 1.
    
 0.830
mst1r
Macrophage stimulating 1 receptor.
  
  0.788
met
MET proto-oncogene, receptor tyrosine kinase.
  
  0.788
LOC114856141
Macrophage-stimulating protein receptor-like.
  
  0.788
LOC114869684
Rab proteins geranylgeranyltransferase component A 1-like.
    
 0.761
rabggtb
Rab geranylgeranyltransferase subunit beta.
    
 0.751
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.