STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854689Transmembrane protein 14C-like. (140 aa)    
Predicted Functional Partners:
nuf2
NUF2 component of NDC80 kinetochore complex.
    
 0.765
ndc80
NDC80 kinetochore complex component.
    
  0.751
spc25
SPC25 component of NDC80 kinetochore complex.
    
  0.714
LOC114864554
Aurora kinase B-like.
     
 0.561
aurka
Aurora kinase A.
     
 0.561
ppox
Protoporphyrinogen oxidase.
   
  
 0.451
isca1
Iron-sulfur cluster assembly 1.
      
 0.416
LOC114859962
Solute carrier family 25 member 39-like.
      
 0.402
LOC114848418
Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial.
   
  
 0.401
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.