STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msh3mutS homolog 3. (1100 aa)    
Predicted Functional Partners:
msh2
mutS homolog 2.
  
0.999
mlh1
mutL homolog 1.
 
 0.998
msh6
mutS homolog 6.
  
 
0.997
pms1
PMS1 homolog 1, mismatch repair system component.
 
 0.996
ENSBSLP00000046310
PMS1 homolog 2, mismatch repair system component.
 
 0.996
fancm
FA complementation group M.
   
 0.986
pcna
Proliferating cell nuclear antigen.
  
 0.983
ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.978
ercc4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.977
pold1
DNA polymerase delta 1, catalytic subunit.
  
 0.973
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.