STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkacaProtein kinase cAMP-activated catalytic subunit alpha. (398 aa)    
Predicted Functional Partners:
prkar1b
Protein kinase cAMP-dependent type I regulatory subunit beta.
 
 
 0.988
prkar1a
Protein kinase cAMP-dependent type I regulatory subunit alpha.
 
 
 0.983
pkia
cAMP-dependent protein kinase inhibitor alpha.
   
 0.964
LOC114855824
cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
 
 
 0.945
LOC114858584
cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
 
 
 0.943
LOC114857744
cAMP-dependent protein kinase type II-beta regulatory subunit-like.
 
 
 0.942
RYR3
Ryanodine receptor 3-like.
    
 0.923
ENSBSLP00000044446
annotation not available
 
 
 0.904
smo
Smoothened, frizzled class receptor.
    
 0.897
gsk3b
Glycogen synthase kinase 3 beta.
   
0.875
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.