STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114869236Early growth response protein 1-A-like. (449 aa)    
Predicted Functional Partners:
LOC114860359
Mitogen-activated protein kinase 1-like.
    
  0.853
mapk1
Mitogen-activated protein kinase 1.
    
  0.853
egr1
Early growth response 1.
  
  
 
0.846
ENSBSLP00000019039
annotation not available
  
  
 
0.841
LOC114845515
Mitogen-activated protein kinase 7-like.
    
  0.836
egr3
Early growth response 3.
  
  
 
0.825
ENSBSLP00000048337
annotation not available
    
  0.578
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.564
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
 0.516
bard1
BRCA1 associated RING domain 1.
    
  0.516
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.