STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857295Oxysterol-binding protein-related protein 5-like. (869 aa)    
Predicted Functional Partners:
LOC114847768
Golgi pH regulator.
 
      0.831
npc1
NPC intracellular cholesterol transporter 1.
   
 0.821
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.820
gale
UDP-galactose-4-epimerase.
     
 0.719
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.686
katnal2
Katanin catalytic subunit A1 like 2.
   
 
 0.657
rhoh
Ras homolog family member H.
    
  0.567
rhoq
Ras homolog family member Q.
    
  0.567
ENSBSLP00000026920
annotation not available
   
 0.552
ENSBSLP00000026933
annotation not available
   
 0.552
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.