STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcm5Minichromosome maintenance complex component 5. (737 aa)    
Predicted Functional Partners:
gins4
GINS complex subunit 4.
   
 0.999
mcm10
Minichromosome maintenance 10 replication initiation factor.
   
 0.999
ero1a
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.999
orc5
Origin recognition complex subunit 5.
   
 0.999
mcmbp
Minichromosome maintenance complex binding protein.
   
 0.999
gins3
GINS complex subunit 3.
   
 0.999
mcm3
Minichromosome maintenance complex component 3.
   
0.999
orc1
Origin recognition complex subunit 1.
   
 0.999
mcm7
Minichromosome maintenance complex component 7.
   
0.999
mcm9
Minichromosome maintenance 9 homologous recombination repair factor.
   
0.999
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.