STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857515Golgi apparatus protein 1-like. (1157 aa)    
Predicted Functional Partners:
SELE
Selectin E.
    
 0.827
ENSBSLP00000004942
Selectin E.
    
 0.827
fam234b
Family with sequence similarity 234 member B.
      
 0.456
aplp2
Amyloid beta precursor like protein 2.
   
  
 0.446
gpatch1
G-patch domain containing 1.
      
 0.435
fadd
Fas associated via death domain.
      
 0.424
c8h17orf75
Chromosome 8 C17orf75 homolog.
      
 0.414
rnaset2
Ribonuclease T2.
      
 0.414
rfwd3
Ring finger and WD repeat domain 3.
    
 
 0.410
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.