STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859017Sterile alpha motif domain-containing protein 10-like. (184 aa)    
Predicted Functional Partners:
alkbh7
alkB homolog 7.
      
 0.522
ENSBSLP00000046204
annotation not available
      
 0.515
nckipsd
NCK interacting protein with SH3 domain.
      
 0.505
SAMD5
Sterile alpha motif domain containing 5.
      
 0.463
samd14
Sterile alpha motif domain containing 14.
      
 0.439
LOC114868261
Transmembrane protein 151A-like.
      
 0.431
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
      
 0.424
ankdd1a
Ankyrin repeat and death domain containing 1A.
      
 0.422
sowahd
Sosondowah ankyrin repeat domain family member D.
      
 0.416
LOC114866460
Transmembrane protein 119-like.
      
 0.414
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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