STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2AZ1Histone H2A.Z. (128 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
   
 0.987
znhit1
Zinc finger HIT-type containing 1.
    
 0.986
vps72
Vacuolar protein sorting 72 homolog.
    
 0.986
actr6
Actin related protein 6.
   
 0.985
yeats4
YEATS domain containing 4.
   
 0.984
actl6a
Actin like 6A.
   
 0.984
ruvbl2
RuvB like AAA ATPase 2.
   
 0.983
cfdp1
Craniofacial development protein 1.
    
 0.981
ep400
E1A binding protein p400.
    
 0.969
srcap
Snf2 related CREBBP activator protein.
    
 0.969
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.