STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrvi1Murine retrovirus integration site 1 homolog. (1143 aa)    
Predicted Functional Partners:
LOC114870401
cGMP-dependent protein kinase 1.
   
 0.888
itpr2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.878
LOC114855079
Inositol 1,4,5-trisphosphate receptor type 1-like.
    
 0.878
itpr3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.878
sun1
Sad1 and UNC84 domain containing 1.
    
 0.827
chp1
Calcineurin like EF-hand protein 1.
    
  0.686
ENSBSLP00000026641
Protein kinase cGMP-dependent 3.
   
 0.647
prkg2
Protein kinase cGMP-dependent 2.
   
 0.647
ENSBSLP00000044446
annotation not available
   
 0.647
ENSBSLP00000050713
annotation not available
     
 0.647
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.