STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
broxBRO1 domain and CAAX motif containing. (410 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.948
LOC114854233
Charged multivesicular body protein 5.
    
 0.902
chmp5
Charged multivesicular body protein 5.
    
 0.902
LOC114852978
Charged multivesicular body protein 4c-like.
   
 0.863
LOC114858940
Charged multivesicular body protein 4b.
   
 0.863
LOC114855998
Charged multivesicular body protein 4b-like.
   
 0.863
LOC114857718
Charged multivesicular body protein 4b-like.
    
 0.822
stam2
Signal transducing adaptor molecule 2.
   
 0.770
LOC114851903
Multivesicular body subunit 12A-like.
     
 0.740
stam
Signal transducing adaptor molecule.
   
 0.722
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.