STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT8Synaptotagmin-1-like. (450 aa)    
Predicted Functional Partners:
LOC114862899
Vesicle-associated membrane protein 8-like.
    
 0.724
LOC114852798
Intersectin-2-like.
     
 0.696
itsn2
Intersectin 2.
     
 0.696
LOC114866026
Regulating synaptic membrane exocytosis protein 2-like.
     
0.648
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.648
dab2
DAB adaptor protein 2.
     
 0.647
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
 0.633
LOC114857267
Synaptotagmin-9-like.
    
 
0.631
LOC114851908
Synaptotagmin-9-like.
    
 
0.631
vamp7
Vesicle associated membrane protein 7.
     
 0.625
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.