STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galt5Beta-1,4-galactosyltransferase 5. (381 aa)    
Predicted Functional Partners:
ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.901
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
     
 0.883
fut8
Fucosyltransferase 8.
     
 0.869
LOC114854589
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.865
LOC114866549
Putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842.
   
 
 0.865
ENSBSLP00000032070
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4.
   
 
 0.865
ENSBSLP00000050335
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b.
   
 
 0.865
galt
Galactose-1-phosphate uridylyltransferase.
     
 0.854
gba2
Glucosylceramidase beta 2.
     
 0.853
LOC114857138
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like.
    
 0.847
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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