STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asah1N-acylsphingosine amidohydrolase 1. (392 aa)    
Predicted Functional Partners:
smpd1
Sphingomyelin phosphodiesterase 1.
   
 0.932
acer1
Alkaline ceramidase 1.
     
 0.921
galc
Galactosylceramidase.
     
 0.920
asah2
N-acylsphingosine amidohydrolase 2.
     
 0.919
gba2
Glucosylceramidase beta 2.
    
 0.913
acer3
Alkaline ceramidase 3.
   
 
 0.913
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.909
acer2
Alkaline ceramidase 2.
     
 0.907
ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.898
LOC114858481
Ceramide kinase-like.
     
 0.891
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.