STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861662Solute carrier family 23 member 2-like. (661 aa)    
Predicted Functional Partners:
gart
annotation not available
  
  
 0.926
umps
Uridine monophosphate synthetase.
  
  
 0.888
LOC114857827
Solute carrier family 23 member 1-like.
  
  
 
0.815
LOC114856130
Vesicle transport protein GOT1A-like.
  
  
 0.763
LOC114857132
Vesicle transport protein GOT1B.
  
  
 0.763
LOC114861393
Vesicle transport protein GOT1B-like.
  
  
 0.763
dhodh
Dihydroorotate dehydrogenase (quinone).
  
  
 0.740
dpyd
Dihydropyrimidine dehydrogenase.
  
  
 0.740
med6
Mediator complex subunit 6.
    
  0.726
sgpl1
Sphingosine-1-phosphate lyase 1.
    
 0.711
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.