STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudcd2NudC domain containing 2. (157 aa)    
Predicted Functional Partners:
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.983
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
   
 0.793
LOC114869669
Lissencephaly-1 homolog B.
   
 0.793
tbc1d31
TBC1 domain family member 31.
   
 0.793
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.749
LOC114865782
Cytoplasmic dynein 1 light intermediate chain 1-like.
    
 0.749
SGO1
Shugoshin 1.
   
 0.735
dync2li1
Dynein cytoplasmic 2 light intermediate chain 1.
     
 0.731
incenp
Inner centromere protein.
     
 0.707
dynlt1
Dynein light chain Tctex-type 1.
     
 0.699
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.