STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000015790annotation not available (233 aa)    
Predicted Functional Partners:
tep1
Telomerase associated protein 1.
    
 0.588
LOC114855982
Complement C1q subcomponent subunit C-like.
   
  0.552
rptor
Regulatory associated protein of MTOR complex 1.
    
 0.484
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.474
LOC114848581
Histone-lysine N-methyltransferase SETDB2-like.
    
  0.469
setdb1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.469
mlst8
MTOR associated protein, LST8 homolog.
    
  0.465
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.464
rps27a
Ribosomal protein S27a.
    
  0.460
trrap
Transformation/transcription domain associated protein.
    
  0.460
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.