STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865447Teashirt homolog 1-like. (1155 aa)    
Predicted Functional Partners:
LOC114866068
Iroquois-class homeodomain protein irx-1-like.
    
 0.551
LOC114870392
Homeobox protein Meis1.
    
 0.551
irx1
Iroquois homeobox 1.
    
 0.551
meis2
Meis homeobox 2.
    
 0.551
ENSBSLP00000009504
annotation not available
    
 0.549
irx5
Iroquois homeobox 5.
    
 0.549
irx3
Iroquois homeobox 3.
    
 0.549
irx4
Iroquois homeobox 4.
    
 0.549
irx2
Iroquois homeobox 2.
    
 0.549
irx6
Iroquois homeobox 6.
    
 0.549
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.