STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nckap5lNCK associated protein 5 like. (1207 aa)    
Predicted Functional Partners:
ruvbl2
RuvB like AAA ATPase 2.
      
 0.469
mbd1
methyl-CpG binding domain protein 1.
  
     0.446
vcam1
Vascular cell adhesion molecule 1.
  
     0.446
LOC114857554
Uncharacterized LOC114857554.
  
     0.441
nckipsd
NCK interacting protein with SH3 domain.
      
 0.431
casc4
Cancer susceptibility 4.
  
     0.428
ar
Androgen receptor.
  
     0.405
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.