STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859387FERM domain-containing protein 4B-like. (1009 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.639
frmd6
FERM domain containing 6.
    
0.607
LOC114870492
FERM domain-containing protein 6-like.
    
0.607
wwc1
WW and C2 domain containing 1.
    
 0.555
LOC114858440
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like.
    
 0.552
LOC114859264
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
 0.552
ENSBSLP00000044311
annotation not available
    
 0.552
LOC114855269
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
 0.552
trip12
Thyroid hormone receptor interactor 12.
    
 0.518
ENSBSLP00000026673
MyoD family inhibitor domain containing.
    
 
 0.501
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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