STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857886B-cell receptor-associated protein 29-like. (236 aa)    
Predicted Functional Partners:
ENSBSLP00000028227
annotation not available
   
 0.707
LOC114844037
Caspase-3-like.
   
 0.707
LOC114844036
Caspase-8-like.
   
 0.707
LOC114847689
Caspase-8-like.
   
 0.707
VAPB
VAMP associated protein B and C.
   
 0.671
LOC114855878
Vesicle-associated membrane protein-associated protein B-like.
   
 0.671
vapa
VAMP associated protein A.
   
 0.671
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.659
dus4l
Dihydrouridine synthase 4 like.
 
    
 0.630
ENSBSLP00000002435
annotation not available
   
 0.613
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.