STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000016305Protocadherin 2 alpha a 15. (786 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 0.515
fat1
FAT atypical cadherin 1.
   
 
0.493
LOC114864048
Protocadherin Fat 2-like.
   
 
0.493
myo9b
Myosin IXB.
    
  0.460
LOC114851875
Unconventional myosin-IXa-like.
    
  0.460
LOC114856831
Unconventional myosin-IXa-like.
    
  0.460
LOC114844672
Unconventional myosin-IXb-like.
    
  0.460
LOC114856819
Junction plakoglobin-like.
    
  0.441
uck1
Uridine-cytidine kinase 1.
    
  0.441
LOC114844021
Uridine-cytidine kinase 2-B.
    
  0.441
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.