STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kremen1Kringle containing transmembrane protein 1. (499 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
   
 0.999
dkk1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.969
cenpt
Centromere protein T.
   
 0.956
cenpw
Centromere protein W.
   
 0.954
lrp6
LDL receptor related protein 6.
    
 0.934
lrp5
LDL receptor related protein 5.
    
 0.934
ENSBSLP00000004319
FA core complex associated protein 24.
    
 0.920
pop1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.917
pop4
POP4 homolog, ribonuclease P/MRP subunit.
   
 0.914
pop5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.913
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.