skida1 protein (Betta splendens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

skida1

SKI/DACH domain containing 1. (779 aa)

Predicted Functional Partners:

mysm1

0.900

actl6a

0.852

phf10

0.825

arid2

0.821

LOC114866972

0.818

smarcb1

0.818

LOC114855556

0.804

LOC114855931

0.804

LOC114859968

0.801

SMARCE1

0.797

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC114855556	LOC114855931	ENSBSLP00000018042	ENSBSLP00000041657	Protein polybromo-1-like.	Protein polybromo-1-like.	0.926
LOC114855556	LOC114859968	ENSBSLP00000018042	ENSBSLP00000025577	Protein polybromo-1-like.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.	0.974
LOC114855556	LOC114866972	ENSBSLP00000018042	ENSBSLP00000010171	Protein polybromo-1-like.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like.	0.974
LOC114855556	SMARCE1	ENSBSLP00000018042	ENSBSLP00000026846	Protein polybromo-1-like.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.974
LOC114855556	actl6a	ENSBSLP00000018042	ENSBSLP00000038290	Protein polybromo-1-like.	Actin like 6A.	0.989
LOC114855556	arid2	ENSBSLP00000018042	ENSBSLP00000030768	Protein polybromo-1-like.	AT-rich interaction domain 2.	0.996
LOC114855556	mysm1	ENSBSLP00000018042	ENSBSLP00000032640	Protein polybromo-1-like.	Myb like, SWIRM and MPN domains 1.	0.959
LOC114855556	phf10	ENSBSLP00000018042	ENSBSLP00000022048	Protein polybromo-1-like.	PHD finger protein 10.	0.987
LOC114855556	skida1	ENSBSLP00000018042	ENSBSLP00000016365	Protein polybromo-1-like.	SKI/DACH domain containing 1.	0.804
LOC114855556	smarcb1	ENSBSLP00000018042	ENSBSLP00000022979	Protein polybromo-1-like.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.974
LOC114855931	LOC114855556	ENSBSLP00000041657	ENSBSLP00000018042	Protein polybromo-1-like.	Protein polybromo-1-like.	0.926
LOC114855931	LOC114859968	ENSBSLP00000041657	ENSBSLP00000025577	Protein polybromo-1-like.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.	0.974
LOC114855931	LOC114866972	ENSBSLP00000041657	ENSBSLP00000010171	Protein polybromo-1-like.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like.	0.974
LOC114855931	SMARCE1	ENSBSLP00000041657	ENSBSLP00000026846	Protein polybromo-1-like.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.974
LOC114855931	actl6a	ENSBSLP00000041657	ENSBSLP00000038290	Protein polybromo-1-like.	Actin like 6A.	0.989
LOC114855931	arid2	ENSBSLP00000041657	ENSBSLP00000030768	Protein polybromo-1-like.	AT-rich interaction domain 2.	0.998
LOC114855931	mysm1	ENSBSLP00000041657	ENSBSLP00000032640	Protein polybromo-1-like.	Myb like, SWIRM and MPN domains 1.	0.959
LOC114855931	phf10	ENSBSLP00000041657	ENSBSLP00000022048	Protein polybromo-1-like.	PHD finger protein 10.	0.987
LOC114855931	skida1	ENSBSLP00000041657	ENSBSLP00000016365	Protein polybromo-1-like.	SKI/DACH domain containing 1.	0.804
LOC114855931	smarcb1	ENSBSLP00000041657	ENSBSLP00000022979	Protein polybromo-1-like.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.974