STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858476Zinc fingers and homeoboxes protein 3-like. (1231 aa)    
Predicted Functional Partners:
sdhd
Succinate dehydrogenase complex subunit D.
    
 0.779
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.764
cactin
Cactin, spliceosome C complex subunit.
    
 0.723
cisd2
CDGSH iron sulfur domain 2.
    
 0.723
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.723
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.622
ENSBSLP00000023552
annotation not available
   
 0.622
timm10b
Translocase of inner mitochondrial membrane 10B.
   
 0.622
nfya
Nuclear transcription factor Y subunit alpha.
    
 
 0.575
dhx35
DEAH-box helicase 35.
    
 
 0.573
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.