STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aco1Aconitase 1. (921 aa)    
Predicted Functional Partners:
cs
Citrate synthase.
  
 0.987
LOC114864912
Malate synthase-like.
  
 0.970
fbxl5
F-box and leucine rich repeat protein 5.
    
 0.964
idh1
Isocitrate dehydrogenase (NADP(+)) 1.
  
 0.958
LOC114857337
Isocitrate dehydrogenase [NADP], mitochondrial.
  
 0.957
senp8
SUMO peptidase family member, NEDD8 specific.
  
 
 0.949
LOC114852186
Isocitrate dehydrogenase [NADP], mitochondrial-like.
  
 0.942
idh3b
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta.
  
 0.913
idh3g
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma.
  
 0.913
suclg1
succinate-CoA ligase alpha subunit.
  
 0.905
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.