STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114851278HLA class II histocompatibility antigen, DRB1-8 beta chain-like. (263 aa)    
Predicted Functional Partners:
cd74
CD74 molecule.
   
 0.952
LOC114842434
H-2 class II histocompatibility antigen, A-U alpha chain-like.
 
0.947
ENSBSLP00000054957
annotation not available
   
  0.934
LOC114842934
T-cell surface glycoprotein CD4-like.
  
 0.932
ENSBSLP00000044137
annotation not available
   
  0.932
LOC114851280
H-2 class II histocompatibility antigen, A-U alpha chain-like.
 
0.921
LOC114850360
H-2 class II histocompatibility antigen, A-U alpha chain-like.
 
0.921
rps14
Ribosomal protein S14.
   
 0.918
ENSBSLP00000055070
annotation not available
    
  0.885
LOC114848647
T-cell surface glycoprotein CD3 zeta chain-like.
   
 
 0.810
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.