STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd2Potassium channel tetramerization domain containing 2. (269 aa)    
Predicted Functional Partners:
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.998
sumo1
Small ubiquitin like modifier 1.
   
 0.982
sae1
SUMO1 activating enzyme subunit 1.
  
 0.973
uba2
Ubiquitin like modifier activating enzyme 2.
   
 0.972
SPOP
Speckle-type POZ protein.
    
 0.959
pcna
Proliferating cell nuclear antigen.
   
 0.959
spopl
Speckle type BTB/POZ protein like.
    
 0.959
nsmce2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
   
 0.941
klhl22
Kelch like family member 22.
   
 0.929
ranbp1
RAN binding protein 1.
   
 0.928
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.