STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp4r1Protein phosphatase 4 regulatory subunit 1. (968 aa)    
Predicted Functional Partners:
ppp4c
Protein phosphatase 4 catalytic subunit.
    
 0.994
ptpa
Protein phosphatase 2 phosphatase activator.
   
 0.991
ppp2r5b
Protein phosphatase 2 regulatory subunit B'beta.
   
 0.976
ppp4r3a
Protein phosphatase 4 regulatory subunit 3A.
     
 0.964
LOC114867941
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
0.955
ppp2r2d
Protein phosphatase 2 regulatory subunit Bdelta.
    
 0.954
ppp4r3b
Protein phosphatase 4 regulatory subunit 3B.
     
 0.953
PPP2R2C
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform.
    
 0.952
LOC114848119
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform.
   
 0.937
nkd1
NKD inhibitor of WNT signaling pathway 1.
    
  0.937
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.