STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc31a1Solute carrier family 31 member 1. (189 aa)    
Predicted Functional Partners:
mtf1
Metal regulatory transcription factor 1.
    
 
 0.560
ccs
Copper chaperone for superoxide dismutase.
    
 
 0.559
LOC114842936
Copper-transporting ATPase 2-like.
    
 
 0.551
atp7a
ATPase copper transporting alpha.
    
 
 0.551
atox1
Antioxidant 1 copper chaperone.
      
 0.540
LOC114847640
Cytochrome c oxidase copper chaperone.
   
  
 0.487
ENSBSLP00000002755
annotation not available
   
 
 0.449
LOC114856031
Natural resistance-associated macrophage protein 2-like.
      
 0.431
LOC114845450
Cytochrome c oxidase assembly protein COX11, mitochondrial.
      
 0.418
yipf6
Yip1 domain family member 6.
    
 
 0.411
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.