STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861122Heme-binding protein 2-like. (218 aa)    
Predicted Functional Partners:
pef1
penta-EF-hand domain containing 1.
    
   0.697
pdcd6
Programmed cell death 6.
    
   0.697
LOC114858201
Bcl-2-like protein 1.
   
 
 0.684
LOC114855762
Bcl-2-like protein 1.
   
 
 0.684
LRPPRC
Leucine rich pentatricopeptide repeat containing.
    
 
 0.448
LOC114865883
Grancalcin-like.
    
 
 0.432
LOC114856945
Cat eye syndrome critical region protein 2.
      
 0.403
bax
BCL2 associated X, apoptosis regulator.
    
   0.400
LOC114854594
Bcl-2-related ovarian killer protein homolog A-like.
    
   0.400
ENSBSLP00000007745
annotation not available
    
   0.400
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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