STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853834Calreticulin-like. (426 aa)    
Predicted Functional Partners:
LOC114866127
Tapasin-like.
    
 0.984
hsp90b1
Heat shock protein 90 beta family member 1.
   
 0.983
pdia3
Protein disulfide isomerase family A member 3.
   
 0.982
LOC114865478
Protein disulfide-isomerase A3-like.
   
 0.959
hspa5
Heat shock protein family A (Hsp70) member 5.
   
 0.957
pdia4
Protein disulfide isomerase family A member 4.
   
 0.956
pdia6
Protein disulfide isomerase family A member 6.
   
 0.937
LOC114866140
H-2 class I histocompatibility antigen, Q9 alpha chain-like.
    
 0.936
canx
Calnexin.
   
0.919
LOC114855850
Calnexin-like.
   
0.919
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.