STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000017529annotation not available (415 aa)    
Predicted Functional Partners:
babam1
BRISC and BRCA1 A complex member 1.
    
 0.835
ENSBSLP00000015271
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.833
babam2
BRISC and BRCA1 A complex member 2.
    
 0.833
brca1
BRCA1 DNA repair associated.
    
 0.794
bard1
BRCA1 associated RING domain 1.
    
 0.782
rps27a
Ribosomal protein S27a.
    
  0.758
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.746
ENSBSLP00000037601
Ubiquitin B.
    
  0.737
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.729
ENSBSLP00000006288
annotation not available
    
 0.690
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.